Installation#
In order to use showyourwork!, you’ll also need a working installation of the conda package manager.
We recommend using miniforge.
Note
It is possible to run Snakemake without conda or mamba by
passing the --no-conda flag (see Command Line Interface).
However, we recommend using conda whenever possible to improve reproduciblity.
When using showyourwork without conda, you must run it from an environment with
all required software dependencies and a working
Tectonic installation.
Create a new conda environment with the necessary dependencies:
mamba create -n showyourwork pip
mamba activate showyourwork
Important
A lot of time passed since the last release: there have been many important changes to the codebase and a change in the active team of maintainers.
We are working hard for a new release soon! Until then we strongly suggest you to use the latest development version.
pip install showyourwork
pip install git+https://github.com/showyourwork/showyourwork